HL_7ZRS_022

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_022 not in the Motif Atlas

Homologous match to HL_4V88_207

Geometric discrepancy: 0.0734

The information below is about HL_4V88_207

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZRS|1|2|C|937
7ZRS|1|2|G|938
7ZRS|1|2|A|939
7ZRS|1|2|A|940
7ZRS|1|2|A|941
7ZRS|1|2|G|942

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AN

40S ribosomal protein S13

Chain Aa

RPS26B isoform 1