HL_7ZRS_045
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_045 not in the Motif Atlas
- Homologous match to HL_5TBW_003
- Geometric discrepancy: 0.0694
- The information below is about HL_5TBW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
7ZRS|1|5|C|90
7ZRS|1|5|G|91
7ZRS|1|5|G|92
7ZRS|1|5|C|93
7ZRS|1|5|G|94
7ZRS|1|5|A|95
7ZRS|1|5|G|96
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain BK
- 60S ribosomal protein L13-A
- Chain BP
- 60S ribosomal protein L18-A
- Chain BZ
- 60S ribosomal protein L28
- Chain Bn
- 60S ribosomal protein L42-A
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