HL_7ZRS_065

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CGAAAUG

Length

7 nucleotides

Bulged bases

7ZRS|1|5|U|1029

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_065 not in the Motif Atlas

Homologous match to HL_5TBW_023

Geometric discrepancy: 0.2003

The information below is about HL_5TBW_023

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZRS|1|5|C|1024
7ZRS|1|5|G|1025
7ZRS|1|5|A|1026
7ZRS|1|5|A|1027
7ZRS|1|5|A|1028
7ZRS|1|5|U|1029
7ZRS|1|5|G|1030

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AP

RPS15 isoform 1

Chain BJ

RPL11B isoform 1