HL_7ZRS_099

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_099 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1859

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7ZRS|1|5|A|2674
7ZRS|1|5|A|2675
7ZRS|1|5|C|2676
7ZRS|1|5|A|2677
7ZRS|1|5|G|2678
7ZRS|1|5|A|2679
7ZRS|1|5|A|2680
7ZRS|1|5|A|2681
7ZRS|1|5|U|2682

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BJ

RPL11B isoform 1