HL_7ZRS_100
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CAAAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_100 not in the Motif Atlas
- Homologous match to HL_8C3A_058
- Geometric discrepancy: 0.0916
- The information below is about HL_8C3A_058
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
7ZRS|1|5|C|2694
7ZRS|1|5|A|2695
7ZRS|1|5|A|2696
7ZRS|1|5|A|2697
7ZRS|1|5|A|2698
7ZRS|1|5|G|2699
7ZRS|1|5|G|2700
7ZRS|1|5|G|2701
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BI
- RPL10 isoform 1
- Chain BS
- 60S ribosomal protein L21-A
- Chain Bn
- 60S ribosomal protein L42-A
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