HL_7ZRS_113

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GUAUACGAC

Length

9 nucleotides

Bulged bases

7ZRS|1|5|U|3305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_113 not in the Motif Atlas

Geometric match to HL_5TBW_070

Geometric discrepancy: 0.0857

The information below is about HL_5TBW_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7ZRS|1|5|G|3304
7ZRS|1|5|U|3305
7ZRS|1|5|A|3306
7ZRS|1|5|U|3307
7ZRS|1|5|A|3308
7ZRS|1|5|C|3309
7ZRS|1|5|G|3310
7ZRS|1|5|A|3311
7ZRS|1|5|C|3312

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L3

Chain BO

60S ribosomal protein L17-A