HL_7ZRS_114

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7ZRS|1|5|U|3352

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_114 not in the Motif Atlas

Geometric match to HL_5U30_001

Geometric discrepancy: 0.2419

The information below is about HL_5U30_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7ZRS|1|5|C|3351
7ZRS|1|5|U|3352
7ZRS|1|5|U|3353
7ZRS|1|5|G|3354

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AI

40S ribosomal protein S8-A