HL_7ZS5_010
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGUGAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZS5_010 not in the Motif Atlas
- Homologous match to HL_8C3A_010
- Geometric discrepancy: 0.2338
- The information below is about HL_8C3A_010
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7ZS5|1|1|A|357
7ZS5|1|1|G|358
7ZS5|1|1|U|359
7ZS5|1|1|G|360
7ZS5|1|1|A|361
7ZS5|1|1|U|362
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain BE
- 60S ribosomal protein L4-A
- Chain BQ
- 60S ribosomal protein L17-A
- Chain Bk
- 60S ribosomal protein L37-A
- Chain Bm
- 60S ribosomal protein L39
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