HL_7ZS5_013

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_013 not in the Motif Atlas

Homologous match to HL_8P9A_124

Geometric discrepancy: 0.5988

The information below is about HL_8P9A_124

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZS5|1|1|U|541
7ZS5|1|1|G|542
7ZS5|1|1|C|543
7ZS5|1|1|C|544
7ZS5|1|1|U|545
7ZS5|1|1|C|546
7ZS5|1|1|G|547
7ZS5|1|1|G|548
7ZS5|1|1|U|549
7ZS5|1|1|A|550

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BT

60S ribosomal protein L20-A