HL_7ZS5_024

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAAUG

Length

7 nucleotides

Bulged bases

7ZS5|1|1|U|1028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_024 not in the Motif Atlas

Homologous match to HL_5TBW_023

Geometric discrepancy: 0.5597

The information below is about HL_5TBW_023

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZS5|1|1|C|1023
7ZS5|1|1|G|1024
7ZS5|1|1|A|1025
7ZS5|1|1|A|1026
7ZS5|1|1|A|1027
7ZS5|1|1|U|1028
7ZS5|1|1|G|1029

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BL

60S ribosomal protein L11-B