HL_7ZUX_018

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

7ZUX|1|2|G|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_018 not in the Motif Atlas

Homologous match to HL_4V88_203

Geometric discrepancy: 0.1309

The information below is about HL_4V88_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7ZUX|1|2|U|764
7ZUX|1|2|G|765
7ZUX|1|2|U|766
7ZUX|1|2|U|767
7ZUX|1|2|C|768
7ZUX|1|2|A|769
7ZUX|1|2|A|770
7ZUX|1|2|A|771
7ZUX|1|2|G|772

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain DE

40S ribosomal protein S4-A

Chain DJ

40S ribosomal protein S9-A

Chain DY

40S ribosomal protein S24-A