3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CAUUUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUX_031 not in the Motif Atlas
Homologous match to HL_8C3A_221
Geometric discrepancy: 0.5603
The information below is about HL_8C3A_221
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_48417.3
Basepair signature
cWW-F-F
Number of instances in this motif group
23

Unit IDs

7ZUX|1|2|C|1359
7ZUX|1|2|A|1360
7ZUX|1|2|U|1361
7ZUX|1|2|U|1362
7ZUX|1|2|U|1363
7ZUX|1|2|G|1364

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain DF
40S ribosomal protein S5
Chain DQ
40S ribosomal protein S16-A
Chain DT
40S ribosomal protein S19-A

Coloring options:


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