HL_7ZUX_047

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUGGAACA

Length

8 nucleotides

Bulged bases

7ZUX|1|5|C|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_047 not in the Motif Atlas

Homologous match to HL_8C3A_005

Geometric discrepancy: 0.0754

The information below is about HL_8C3A_005

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_58705.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

23

Unit IDs

7ZUX|1|5|U|194
7ZUX|1|5|U|195
7ZUX|1|5|G|196
7ZUX|1|5|G|197
7ZUX|1|5|A|198
7ZUX|1|5|A|199
7ZUX|1|5|C|200
7ZUX|1|5|A|201

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EC

60S ribosomal protein L4-A

Chain EX

60S ribosomal protein L26-A

Chain Ed

60S ribosomal protein L32