HL_7ZUX_084

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAACAG

Length

7 nucleotides

Bulged bases

7ZUX|1|5|C|1867

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_084 not in the Motif Atlas

Homologous match to HL_8C3A_042

Geometric discrepancy: 0.1344

The information below is about HL_8C3A_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZUX|1|5|U|1863
7ZUX|1|5|G|1864
7ZUX|1|5|A|1865
7ZUX|1|5|A|1866
7ZUX|1|5|C|1867
7ZUX|1|5|A|1868
7ZUX|1|5|G|1869

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EQ

60S ribosomal protein L19-A