HL_7ZUX_089

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AGAAAGU

Length

7 nucleotides

Bulged bases

7ZUX|1|5|G|2170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_089 not in the Motif Atlas

Homologous match to HL_8C3A_047

Geometric discrepancy: 0.095

The information below is about HL_8C3A_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZUX|1|5|A|2165
7ZUX|1|5|G|2166
7ZUX|1|5|A|2167
7ZUX|1|5|A|2168
7ZUX|1|5|A|2169
7ZUX|1|5|G|2170
7ZUX|1|5|U|2171

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EA

60S ribosomal protein L2-A

Chain EG

60S ribosomal protein L8-A

Chain EM

60S ribosomal protein L15-A