HL_7ZUX_093

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7ZUX|1|5|A|2373, 7ZUX|1|5|A|2374, 7ZUX|1|5|C|2375

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_093 not in the Motif Atlas

Homologous match to HL_8C3A_051

Geometric discrepancy: 0.0481

The information below is about HL_8C3A_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZUX|1|5|G|2370
7ZUX|1|5|G|2371
7ZUX|1|5|G|2372
7ZUX|1|5|A|2373
7ZUX|1|5|A|2374
7ZUX|1|5|C|2375
7ZUX|1|5|G|2376
7ZUX|1|5|G|2377
7ZUX|1|5|G|2378
7ZUX|1|5|C|2379

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein L3

Chain Ed

60S ribosomal protein L32