HL_7ZUX_097

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7ZUX|1|5|G|2619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_097 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.125

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7ZUX|1|5|C|2617
7ZUX|1|5|U|2618
7ZUX|1|5|G|2619
7ZUX|1|5|G|2620
7ZUX|1|5|G|2621
7ZUX|1|5|G|2622
7ZUX|1|5|C|2623
7ZUX|1|5|G|2624
7ZUX|1|5|G|2625

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain EI

60S ribosomal protein L10

Chain Ea

60S ribosomal protein L29