HL_7ZUX_102

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_102 not in the Motif Atlas

Homologous match to HL_8C3A_060

Geometric discrepancy: 0.1347

The information below is about HL_8C3A_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZUX|1|5|U|2745
7ZUX|1|5|G|2746
7ZUX|1|5|A|2747
7ZUX|1|5|A|2748
7ZUX|1|5|A|2749
7ZUX|1|5|G|2750

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain ED

60S ribosomal protein L5

Chain ES

60S ribosomal protein L21-A