HL_7ZUX_110

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

7ZUX|1|5|G|3117, 7ZUX|1|5|C|3121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_110 not in the Motif Atlas

Homologous match to HL_8C3A_068

Geometric discrepancy: 0.0756

The information below is about HL_8C3A_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.9

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7ZUX|1|5|C|3111
7ZUX|1|5|U|3112
7ZUX|1|5|G|3113
7ZUX|1|5|A|3114
7ZUX|1|5|A|3115
7ZUX|1|5|C|3116
7ZUX|1|5|G|3117
7ZUX|1|5|C|3118
7ZUX|1|5|C|3119
7ZUX|1|5|U|3120
7ZUX|1|5|C|3121
7ZUX|1|5|U|3122
7ZUX|1|5|A|3123
7ZUX|1|5|A|3124
7ZUX|1|5|G|3125

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EH

60S ribosomal protein L9-A

Chain EN

60S ribosomal protein L16-A

Chain El

60S ribosomal protein L40-A