HL_7ZUX_118

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAGCCUGGUAG

Length

11 nucleotides

Bulged bases

7ZUX|1|7|C|16, 7ZUX|1|7|G|19, 7ZUX|1|7|G|20, 7ZUX|1|7|U|21

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_118 not in the Motif Atlas

Homologous match to HL_1QF6_001

Geometric discrepancy: 0.1824

The information below is about HL_1QF6_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20490.1

Basepair signature

cWW-cWS-F

Number of instances in this motif group

13

Unit IDs

7ZUX|1|7|C|13
7ZUX|1|7|A|14
7ZUX|1|7|G|15
7ZUX|1|7|C|16
7ZUX|1|7|C|17
7ZUX|1|7|U|18|||A
7ZUX|1|7|G|19
7ZUX|1|7|G|20
7ZUX|1|7|U|21
7ZUX|1|7|A|22
7ZUX|1|7|G|23

Current chains

Chain 7

P/E tRNA

Nearby chains

Chain DZ

40S ribosomal protein S25-A