HL_7ZW0_002

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAAUUUAUACAG

Length

12 nucleotides

Bulged bases

7ZW0|1|2|U|74, 7ZW0|1|2|U|77

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_002 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1212

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7ZW0|1|2|C|70
7ZW0|1|2|A|71
7ZW0|1|2|A|72
7ZW0|1|2|U|73
7ZW0|1|2|U|74
7ZW0|1|2|U|75
7ZW0|1|2|A|76
7ZW0|1|2|U|77
7ZW0|1|2|A|78
7ZW0|1|2|C|79
7ZW0|1|2|A|80
7ZW0|1|2|G|81

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sT

40S ribosomal protein S6-B