HL_7ZW0_011

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

7ZW0|1|2|A|416

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_011 not in the Motif Atlas

Geometric match to HL_4V88_196

Geometric discrepancy: 0.1037

The information below is about HL_4V88_196

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7ZW0|1|2|C|414
7ZW0|1|2|C|415
7ZW0|1|2|A|416
7ZW0|1|2|A|417
7ZW0|1|2|G|418
7ZW0|1|2|G|419

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LY

60S ribosomal protein L23-A

Chain sT

40S ribosomal protein S6-B