3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UAAUUCA
Length
7 nucleotides
Bulged bases
7ZW0|1|2|A|452, 7ZW0|1|2|U|454, 7ZW0|1|2|C|455
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZW0_012 not in the Motif Atlas
Geometric match to HL_5NFV_001
Geometric discrepancy: 0.1485
The information below is about HL_5NFV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_69752.2
Basepair signature
cWW-F
Number of instances in this motif group
7

Unit IDs

7ZW0|1|2|U|450
7ZW0|1|2|A|451
7ZW0|1|2|A|452
7ZW0|1|2|U|453
7ZW0|1|2|U|454
7ZW0|1|2|C|455
7ZW0|1|2|A|456

Current chains

Chain 2
18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS
40S ribosomal protein S4-B
Chain sd
40S ribosomal protein S24-A

Coloring options:


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