HL_7ZW0_017

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

7ZW0|1|2|G|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_017 not in the Motif Atlas

Geometric match to HL_4V88_203

Geometric discrepancy: 0.0697

The information below is about HL_4V88_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7ZW0|1|2|U|764
7ZW0|1|2|G|765
7ZW0|1|2|U|766
7ZW0|1|2|U|767
7ZW0|1|2|C|768
7ZW0|1|2|A|769
7ZW0|1|2|A|770
7ZW0|1|2|A|771
7ZW0|1|2|G|772

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS

40S ribosomal protein S4-B

Chain sW

40S ribosomal protein S9-A

Chain sd

40S ribosomal protein S24-A