HL_7ZW0_028

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_028 not in the Motif Atlas

Geometric match to HL_4V9F_065

Geometric discrepancy: 0.0663

The information below is about HL_4V9F_065

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7ZW0|1|2|A|1296
7ZW0|1|2|G|1297
7ZW0|1|2|U|1298
7ZW0|1|2|G|1299
7ZW0|1|2|A|1300
7ZW0|1|2|U|1301

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sP

40S ribosomal protein S0-A

Chain sR

40S ribosomal protein S2