HL_7ZW0_031

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_031 not in the Motif Atlas

Geometric match to HL_4V88_217

Geometric discrepancy: 0.3475

The information below is about HL_4V88_217

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_67216.9

Basepair signature

cWW-cWW-F-tSH

Number of instances in this motif group

9

Unit IDs

7ZW0|1|2|U|1396
7ZW0|1|2|U|1397
7ZW0|1|2|U|1398
7ZW0|1|2|C|1399
7ZW0|1|2|A|1400
7ZW0|1|2|A|1401
7ZW0|1|2|G|1402

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sG

40S ribosomal protein S17-A

Chain sh

FAP1 isoform 1