HL_7ZW0_046

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_046 not in the Motif Atlas

Homologous match to HL_8C3A_010

Geometric discrepancy: 0.0505

The information below is about HL_8C3A_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZW0|1|LA|A|357
7ZW0|1|LA|G|358
7ZW0|1|LA|U|359
7ZW0|1|LA|G|360
7ZW0|1|LA|A|361
7ZW0|1|LA|U|362

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LG

60S ribosomal protein L4-A

Chain Lm

60S ribosomal protein L37-A

Chain Lo

60S ribosomal protein L39