HL_7ZW0_059

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGAAAUG

Length

7 nucleotides

Bulged bases

7ZW0|1|LA|U|1028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_059 not in the Motif Atlas

Geometric match to HL_5TBW_023

Geometric discrepancy: 0.1365

The information below is about HL_5TBW_023

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZW0|1|LA|C|1023
7ZW0|1|LA|G|1024
7ZW0|1|LA|A|1025
7ZW0|1|LA|A|1026
7ZW0|1|LA|A|1027
7ZW0|1|LA|U|1028
7ZW0|1|LA|G|1029

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LN

60S ribosomal protein L11-A

Chain sE

RPS15 isoform 1