HL_7ZW0_071

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUUAAGAUUC

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|U|1606, 7ZW0|1|LA|U|1607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_071 not in the Motif Atlas

Homologous match to HL_8C3A_035

Geometric discrepancy: 0.0737

The information below is about HL_8C3A_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35087.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|G|1599
7ZW0|1|LA|U|1600
7ZW0|1|LA|U|1601
7ZW0|1|LA|A|1602
7ZW0|1|LA|A|1603
7ZW0|1|LA|G|1604
7ZW0|1|LA|A|1605
7ZW0|1|LA|U|1606
7ZW0|1|LA|U|1607
7ZW0|1|LA|C|1608

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LU

60S ribosomal protein L19-A

Chain La

60S ribosomal protein L25

Chain Lj

60S ribosomal protein L34-A