HL_7ZW0_083

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAAAGU

Length

7 nucleotides

Bulged bases

7ZW0|1|LA|G|2169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_083 not in the Motif Atlas

Homologous match to HL_8C3A_047

Geometric discrepancy: 0.0644

The information below is about HL_8C3A_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZW0|1|LA|A|2164
7ZW0|1|LA|G|2165
7ZW0|1|LA|A|2166
7ZW0|1|LA|A|2167
7ZW0|1|LA|A|2168
7ZW0|1|LA|G|2169
7ZW0|1|LA|U|2170

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain LK

60S ribosomal protein L8-A

Chain LQ

60S ribosomal protein L15-A