HL_7ZW0_084

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_084 not in the Motif Atlas

Homologous match to HL_8C3A_048

Geometric discrepancy: 0.1014

The information below is about HL_8C3A_048

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZW0|1|LA|A|2220
7ZW0|1|LA|G|2221
7ZW0|1|LA|A|2222
7ZW0|1|LA|A|2223
7ZW0|1|LA|A|2224
7ZW0|1|LA|U|2225

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LB

60S ribosomal protein L1-A

Chain Ll

60S ribosomal protein L36-A

Chain Lr

60S ribosomal protein L42-A