HL_7ZW0_087

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|A|2372, 7ZW0|1|LA|A|2373, 7ZW0|1|LA|C|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_087 not in the Motif Atlas

Homologous match to HL_8C3A_051

Geometric discrepancy: 0.0422

The information below is about HL_8C3A_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|G|2369
7ZW0|1|LA|G|2370
7ZW0|1|LA|G|2371
7ZW0|1|LA|A|2372
7ZW0|1|LA|A|2373
7ZW0|1|LA|C|2374
7ZW0|1|LA|G|2375
7ZW0|1|LA|G|2376
7ZW0|1|LA|G|2377
7ZW0|1|LA|C|2378

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain Lh

60S ribosomal protein L32