HL_7ZW0_090

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7ZW0|1|LA|G|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_090 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0822

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7ZW0|1|LA|C|2616
7ZW0|1|LA|U|2617
7ZW0|1|LA|G|2618
7ZW0|1|LA|G|2619
7ZW0|1|LA|G|2620
7ZW0|1|LA|G|2621
7ZW0|1|LA|C|2622
7ZW0|1|LA|G|2623
7ZW0|1|LA|G|2624

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LM

60S ribosomal protein L10

Chain Le

60S ribosomal protein L29

Chain sl

Transfer RNA; tRNA