HL_7ZW0_092

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_092 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1863

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7ZW0|1|LA|A|2673
7ZW0|1|LA|A|2674
7ZW0|1|LA|C|2675
7ZW0|1|LA|A|2676
7ZW0|1|LA|G|2677
7ZW0|1|LA|A|2678
7ZW0|1|LA|A|2679
7ZW0|1|LA|A|2680
7ZW0|1|LA|U|2681

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LN

60S ribosomal protein L11-A

Chain sl

Transfer RNA; tRNA