HL_7ZW0_103

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

7ZW0|1|LA|G|3116, 7ZW0|1|LA|C|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_103 not in the Motif Atlas

Homologous match to HL_8C3A_068

Geometric discrepancy: 0.0517

The information below is about HL_8C3A_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.9

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|C|3110
7ZW0|1|LA|U|3111
7ZW0|1|LA|G|3112
7ZW0|1|LA|A|3113
7ZW0|1|LA|A|3114
7ZW0|1|LA|C|3115
7ZW0|1|LA|G|3116
7ZW0|1|LA|C|3117
7ZW0|1|LA|C|3118
7ZW0|1|LA|U|3119
7ZW0|1|LA|C|3120
7ZW0|1|LA|U|3121
7ZW0|1|LA|A|3122
7ZW0|1|LA|A|3123
7ZW0|1|LA|G|3124

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LL

60S ribosomal protein L9-A

Chain LR

60S ribosomal protein L16-A

Chain Lp

60S ribosomal protein L40-A