HL_7ZW0_106

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUAUACGAC

Length

9 nucleotides

Bulged bases

7ZW0|1|LA|U|3304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_106 not in the Motif Atlas

Homologous match to HL_8C3A_071

Geometric discrepancy: 0.0509

The information below is about HL_8C3A_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7ZW0|1|LA|G|3303
7ZW0|1|LA|U|3304
7ZW0|1|LA|A|3305
7ZW0|1|LA|U|3306
7ZW0|1|LA|A|3307
7ZW0|1|LA|C|3308
7ZW0|1|LA|G|3309
7ZW0|1|LA|A|3310
7ZW0|1|LA|C|3311

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LS

60S ribosomal protein L17-A

Chain Lg

60S ribosomal protein L31-A