HL_7ZW0_112

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUAUUC

Length

6 nucleotides

Bulged bases

7ZW0|1|LD|U|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_112 not in the Motif Atlas

Geometric match to HL_5TBW_076

Geometric discrepancy: 0.1124

The information below is about HL_5TBW_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_45177.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LD|G|124
7ZW0|1|LD|U|125
7ZW0|1|LD|A|126
7ZW0|1|LD|U|127
7ZW0|1|LD|U|128
7ZW0|1|LD|C|129

Current chains

Chain LD

5.8S ribosomal RNA (RDN58-1)

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain Lt

60S ribosomal protein L41-A