HL_7ZW0_121
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZW0_121 not in the Motif Atlas
- Homologous match to HL_8P9A_186
- Geometric discrepancy: 0.0608
- The information below is about HL_8P9A_186
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93438.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7ZW0|1|LD|C|47
7ZW0|1|LD|A|48
7ZW0|1|LD|G|49
7ZW0|1|LD|C|50
7ZW0|1|LD|G|51
7ZW0|1|LD|A|52
7ZW0|1|LD|A|53
7ZW0|1|LD|A|54
7ZW0|1|LD|U|55
7ZW0|1|LD|G|56
Current chains
- Chain LD
- 5.8S ribosomal RNA (RDN58-1)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain La
- 60S ribosomal protein L25
- Chain Lk
- 60S ribosomal protein L35-A
- Chain Lm
- 60S ribosomal protein L37-A
- Chain Lo
- 60S ribosomal protein L39
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