HL_8A3D_021
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CCUCUCG
- Length
- 7 nucleotides
- Bulged bases
- 8A3D|1|A|C|1439, 8A3D|1|A|U|1440
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A3D_021 not in the Motif Atlas
- Geometric match to HL_4WF9_009
- Geometric discrepancy: 0.3839
- The information below is about HL_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
8A3D|1|A|C|1436
8A3D|1|A|C|1437
8A3D|1|A|U|1438
8A3D|1|A|C|1439
8A3D|1|A|U|1440
8A3D|1|A|C|1447
8A3D|1|A|G|1448
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain K
- 60S ribosomal protein L18
- Chain V
- 60S ribosomal protein L29
- Chain m
- 60S ribosomal protein L7
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