HL_8A3D_041

3D structure

PDB id

8A3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

AGUUCUCUU(PSU)U

Length

11 nucleotides

Bulged bases

8A3D|1|A|U|2631

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3D|1|A|A|2623
8A3D|1|A|G|2624
8A3D|1|A|U|2625
8A3D|1|A|U|2626
8A3D|1|A|C|2627
8A3D|1|A|U|2628
8A3D|1|A|C|2629
8A3D|1|A|U|2630
8A3D|1|A|U|2631
8A3D|1|A|PSU|2632
8A3D|1|A|U|2633

Current chains

Chain A

28S ribosomal RNA

Nearby chains

Chain L

60S ribosomal protein L19

Chain O

60S ribosomal protein L22