HL_8A3L_038
3D structure
- PDB id
- 8A3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into the binding of bS1 to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.42 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A3L_038 not in the Motif Atlas
- Homologous match to HL_5WT1_003
- Geometric discrepancy: 0.2056
- The information below is about HL_5WT1_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
8A3L|1|W|G|54
8A3L|1|W|U|55
8A3L|1|W|U|56
8A3L|1|W|C|57
8A3L|1|W|A|58
8A3L|1|W|A|59
8A3L|1|W|A|60
8A3L|1|W|U|61
8A3L|1|W|C|62
Current chains
- Chain W
- E-site tRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: