3D structure

PDB id
8A3L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into the binding of bS1 to the ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.42 Å

Loop

Sequence
GGGGUCAACCCGACUUAC
Length
18 nucleotides
Bulged bases
8A3L|1|a|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8A3L|1|a|G|880
8A3L|1|a|G|881
8A3L|1|a|G|882
8A3L|1|a|G|883
8A3L|1|a|U|884
8A3L|1|a|C|885
8A3L|1|a|A|886
8A3L|1|a|A|887
8A3L|1|a|C|888
8A3L|1|a|C|889
8A3L|1|a|C|890
8A3L|1|a|G|891
8A3L|1|a|A|892
8A3L|1|a|C|893
8A3L|1|a|U|894
8A3L|1|a|U|895
8A3L|1|a|A|896
8A3L|1|a|C|897

Current chains

Chain a
23S ribosomal RNA

Nearby chains

Chain M
30S ribosomal protein S13
Chain S
30S ribosomal protein S19

Coloring options:

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