HL_8A3L_114

3D structure

PDB id

8A3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into the binding of bS1 to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCC

Length

34 nucleotides

Bulged bases

8A3L|1|a|U|2131, 8A3L|1|a|U|2132, 8A3L|1|a|G|2138, 8A3L|1|a|U|2139, 8A3L|1|a|C|2145, 8A3L|1|a|C|2146, 8A3L|1|a|A|2154, 8A3L|1|a|A|2158

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3L|1|a|G|2128
8A3L|1|a|C|2129
8A3L|1|a|U|2130
8A3L|1|a|U|2131
8A3L|1|a|U|2132
8A3L|1|a|G|2133
8A3L|1|a|A|2134
8A3L|1|a|A|2135
8A3L|1|a|G|2136
8A3L|1|a|U|2137
8A3L|1|a|G|2138
8A3L|1|a|U|2139
8A3L|1|a|G|2140
8A3L|1|a|G|2141
8A3L|1|a|A|2142
8A3L|1|a|C|2143
8A3L|1|a|G|2144
8A3L|1|a|C|2145
8A3L|1|a|C|2146
8A3L|1|a|A|2147
8A3L|1|a|G|2148
8A3L|1|a|U|2149
8A3L|1|a|C|2150
8A3L|1|a|U|2151
8A3L|1|a|G|2152
8A3L|1|a|C|2153
8A3L|1|a|A|2154
8A3L|1|a|U|2155
8A3L|1|a|G|2156
8A3L|1|a|G|2157
8A3L|1|a|A|2158
8A3L|1|a|G|2159
8A3L|1|a|C|2160
8A3L|1|a|C|2161

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain K

30S ribosomal protein S11