HL_8A57_017
3D structure
- PDB id
- 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CGUUAAUG
- Length
- 8 nucleotides
- Bulged bases
- 8A57|1|A|U|590, 8A57|1|A|U|593
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A57_017 not in the Motif Atlas
- Geometric match to HL_4WF9_017
- Geometric discrepancy: 0.1101
- The information below is about HL_4WF9_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50318.1
- Basepair signature
- cWW-cSH-F-F
- Number of instances in this motif group
- 1
Unit IDs
8A57|1|A|C|587
8A57|1|A|G|588
8A57|1|A|U|589
8A57|1|A|U|590
8A57|1|A|A|591
8A57|1|A|A|592
8A57|1|A|U|593
8A57|1|A|G|594
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L13
- Chain U
- 50S ribosomal protein L21
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