HL_8A57_050

3D structure

PDB id

8A57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GCCGAAGAGACGUGUGCGCUAGCAUACGAGGAGGC

Length

35 nucleotides

Bulged bases

8A57|1|A|A|2165, 8A57|1|A|U|2179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A57|1|A|G|2160
8A57|1|A|C|2161
8A57|1|A|C|2162
8A57|1|A|G|2163
8A57|1|A|A|2164
8A57|1|A|A|2165
8A57|1|A|G|2166
8A57|1|A|A|2167
8A57|1|A|G|2168
8A57|1|A|A|2169
8A57|1|A|C|2170
8A57|1|A|G|2171
8A57|1|A|U|2172
8A57|1|A|G|2173
8A57|1|A|U|2174
8A57|1|A|G|2175
8A57|1|A|C|2176
8A57|1|A|G|2177
8A57|1|A|C|2178
8A57|1|A|U|2179
8A57|1|A|A|2180
8A57|1|A|G|2181
8A57|1|A|C|2182
8A57|1|A|A|2183
8A57|1|A|U|2184
8A57|1|A|A|2185
8A57|1|A|C|2186
8A57|1|A|G|2187
8A57|1|A|A|2188
8A57|1|A|G|2189
8A57|1|A|G|2190
8A57|1|A|A|2191
8A57|1|A|G|2192
8A57|1|A|G|2193
8A57|1|A|C|2194

Current chains

Chain A

23S ribosomal RNA

Nearby chains