Loop HL_8A57

3D structure

PDB id: 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å

Loop

Sequence: GUAGGAGCCGAAGAGACGUGUGCGCUAGCAUACGAGGAGGCAAUGGUGGGAUACUACC
Length: 58 nucleotides
Bulged bases: 8A57|1|A|U|2155, 8A57|1|A|A|2156, 8A57|1|A|A|2159, 8A57|1|A|A|2165, 8A57|1|A|C|2178, 8A57|1|A|U|2179, 8A57|1|A|A|2180, 8A57|1|A|G|2199, 8A57|1|A|U|2205
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8A57|1|A|G|2154
8A57|1|A|U|2155
8A57|1|A|A|2156
8A57|1|A|G|2157
8A57|1|A|G|2158
8A57|1|A|A|2159
8A57|1|A|G|2160
8A57|1|A|C|2161
8A57|1|A|C|2162
8A57|1|A|G|2163
8A57|1|A|A|2164
8A57|1|A|A|2165
8A57|1|A|G|2166
8A57|1|A|A|2167
8A57|1|A|G|2168
8A57|1|A|A|2169
8A57|1|A|C|2170
8A57|1|A|G|2171
8A57|1|A|U|2172
8A57|1|A|G|2173
8A57|1|A|U|2174
8A57|1|A|G|2175
8A57|1|A|C|2176
8A57|1|A|G|2177
8A57|1|A|C|2178
8A57|1|A|U|2179
8A57|1|A|A|2180
8A57|1|A|G|2181
8A57|1|A|C|2182
8A57|1|A|A|2183
8A57|1|A|U|2184
8A57|1|A|A|2185
8A57|1|A|C|2186
8A57|1|A|G|2187
8A57|1|A|A|2188
8A57|1|A|G|2189
8A57|1|A|G|2190
8A57|1|A|A|2191
8A57|1|A|G|2192
8A57|1|A|G|2193
8A57|1|A|C|2194
8A57|1|A|A|2195
8A57|1|A|A|2196
8A57|1|A|U|2197
8A57|1|A|G|2198
8A57|1|A|G|2199
8A57|1|A|U|2200
8A57|1|A|G|2201
8A57|1|A|G|2202
8A57|1|A|G|2203
8A57|1|A|A|2204
8A57|1|A|U|2205
8A57|1|A|A|2206
8A57|1|A|C|2207
8A57|1|A|U|2208
8A57|1|A|A|2209
8A57|1|A|C|2210
8A57|1|A|C|2211

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

No other chains within 10Å

HL_8A57_074