HL_8AGZ_053

3D structure

PDB id

8AGZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AAUUCAUUUU

Length

10 nucleotides

Bulged bases

8AGZ|1|f|C|2539

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AGZ|1|f|A|2535
8AGZ|1|f|A|2536
8AGZ|1|f|U|2537
8AGZ|1|f|U|2538
8AGZ|1|f|C|2539
8AGZ|1|f|A|2540
8AGZ|1|f|U|2541
8AGZ|1|f|U|2542
8AGZ|1|f|U|2543
8AGZ|1|f|U|2544

Current chains

Chain f

25S rRNA

Nearby chains