HL_8AGZ_085
3D structure
- PDB id
- 8AGZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCCUGAUUUUAUGCAGGC
- Length
- 18 nucleotides
- Bulged bases
- 8AGZ|1|f|U|1569
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8AGZ|1|f|G|1561
8AGZ|1|f|C|1562
8AGZ|1|f|C|1563
8AGZ|1|f|U|1564
8AGZ|1|f|G|1565
8AGZ|1|f|A|1566
8AGZ|1|f|U|1567
8AGZ|1|f|U|1568
8AGZ|1|f|U|1569
8AGZ|1|f|U|1570
8AGZ|1|f|A|1571
8AGZ|1|f|U|1572
8AGZ|1|f|G|1573
8AGZ|1|f|C|1574
8AGZ|1|f|A|1575
8AGZ|1|f|G|1576
8AGZ|1|f|G|1577
8AGZ|1|f|C|1578
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L25
- Chain d
- 60S ribosomal protein L41-A
- Chain i
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
Coloring options: