HL_8AM9_025

3D structure

PDB id

8AM9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

8AM9|1|B|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AM9|1|B|C|1027
8AM9|1|B|C|1028
8AM9|1|B|U|1029
8AM9|1|B|U|1030
8AM9|1|B|C|1031
8AM9|1|B|G|1032
8AM9|1|B|G|1033
8AM9|1|B|G|1034

Current chains

Chain B

16S ribosomal RNA

Nearby chains