HL_8ANA_028

3D structure

PDB id

8ANA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CCCAGACAGCGUCGAG

Length

16 nucleotides

Bulged bases

8ANA|1|a|A|1046, 8ANA|1|a|G|1107

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ANA|1|a|C|1043
8ANA|1|a|C|1044
8ANA|1|a|C|1045
8ANA|1|a|A|1046
8ANA|1|a|G|1047
8ANA|1|a|A|1048
8ANA|1|a|C|1049
8ANA|1|a|A|1050
8ANA|1|a|G|1051
8ANA|1|a|C|1052
8ANA|1|a|G|1107
8ANA|1|a|U|1108
8ANA|1|a|C|1109
8ANA|1|a|G|1110
8ANA|1|a|A|1111
8ANA|1|a|G|1112

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain g

50S ribosomal protein L6